Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Gm6450-201ENSMUST00000200896 574 ntBASIC14.05□□□□□ -0.16
Alx1Q8C8B0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Gm19208-201ENSMUST00000213861 912 ntBASIC14.05□□□□□ -0.16
Alx1Q8C8B0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Alx1Q8C8B0 Matn2-203ENSMUST00000226766 3252 ntBASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Gm13035-201ENSMUST00000117496 342 ntBASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Gm11663-201ENSMUST00000117888 290 ntBASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Gm28686-201ENSMUST00000187404 609 ntBASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Gm38117-201ENSMUST00000194653 939 ntBASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Gm5369-201ENSMUST00000217499 588 ntBASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Alx1Q8C8B0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Gm23085-201ENSMUST00000157849 293 ntBASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Gm6867-201ENSMUST00000219165 425 ntBASIC14.03□□□□□ -0.16
Alx1Q8C8B0 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Alx1Q8C8B0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms