Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Uba3Q8C878 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Uba3Q8C878 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Uba3Q8C878 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Uba3Q8C878 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Uba3Q8C878 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Uba3Q8C878 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Uba3Q8C878 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Uba3Q8C878 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Uba3Q8C878 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.38
Uba3Q8C878 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Uba3Q8C878 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Uba3Q8C878 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Uba3Q8C878 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Uba3Q8C878 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.7□□□□□ -0.38
Uba3Q8C878 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Uba3Q8C878 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Uba3Q8C878 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Uba3Q8C878 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Uba3Q8C878 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.7□□□□□ -0.38
Uba3Q8C878 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.7□□□□□ -0.38
Uba3Q8C878 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Uba3Q8C878 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.7□□□□□ -0.38
Uba3Q8C878 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Uba3Q8C878 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.7□□□□□ -0.38
Uba3Q8C878 Gm5706-201ENSMUST00000181525 993 ntBASIC12.7□□□□□ -0.38
Uba3Q8C878 Gm45186-201ENSMUST00000206874 478 ntBASIC12.7□□□□□ -0.38
Uba3Q8C878 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.7□□□□□ -0.38
Uba3Q8C878 Gm5455-201ENSMUST00000058710 715 ntBASIC12.7□□□□□ -0.38
Uba3Q8C878 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.7□□□□□ -0.38
Uba3Q8C878 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Uba3Q8C878 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.7□□□□□ -0.38
Uba3Q8C878 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Uba3Q8C878 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Uba3Q8C878 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.69□□□□□ -0.38
Uba3Q8C878 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Uba3Q8C878 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Uba3Q8C878 Gm5419-201ENSMUST00000119301 527 ntBASIC12.69□□□□□ -0.38
Uba3Q8C878 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Uba3Q8C878 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.69□□□□□ -0.38
Uba3Q8C878 Gm7003-201ENSMUST00000195089 312 ntBASIC12.69□□□□□ -0.38
Uba3Q8C878 Gm18893-201ENSMUST00000198416 943 ntBASIC12.69□□□□□ -0.38
Uba3Q8C878 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Gm18056-201ENSMUST00000207670 568 ntBASIC12.69□□□□□ -0.38
Uba3Q8C878 Gm18061-201ENSMUST00000208350 562 ntBASIC12.69□□□□□ -0.38
Uba3Q8C878 Gm18063-201ENSMUST00000208529 568 ntBASIC12.69□□□□□ -0.38
Uba3Q8C878 Gm18052-201ENSMUST00000208750 559 ntBASIC12.69□□□□□ -0.38
Uba3Q8C878 Gm45433-201ENSMUST00000209386 247 ntBASIC12.69□□□□□ -0.38
Uba3Q8C878 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.69□□□□□ -0.38
Uba3Q8C878 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.69□□□□□ -0.38
Uba3Q8C878 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Uba3Q8C878 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Uba3Q8C878 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Uba3Q8C878 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Uba3Q8C878 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Uba3Q8C878 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Uba3Q8C878 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Uba3Q8C878 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.69□□□□□ -0.38
Uba3Q8C878 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Uba3Q8C878 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Uba3Q8C878 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Uba3Q8C878 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms