Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim9Q8C7M3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Gm20482-202ENSMUST00000174729 825 ntBASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Gm32999-201ENSMUST00000192693 562 ntBASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Gm38317-201ENSMUST00000195564 343 ntBASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Gm13097-201ENSMUST00000210722 397 ntBASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Gm5455-201ENSMUST00000058710 715 ntBASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim9Q8C7M3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Gm4607-201ENSMUST00000206649 577 ntBASIC13.29□□□□□ -0.28
Trim9Q8C7M3 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.29□□□□□ -0.28
Trim9Q8C7M3 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim9Q8C7M3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim9Q8C7M3 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms