Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Gm12419-201ENSMUST00000116649 636 ntBASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Gm42779-201ENSMUST00000198807 406 ntBASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a6Q8C6K9 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a6Q8C6K9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a6Q8C6K9 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.9□□□□□ -0.67
Col6a6Q8C6K9 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.9□□□□□ -0.67
Col6a6Q8C6K9 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a6Q8C6K9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Col6a6Q8C6K9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a6Q8C6K9 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a6Q8C6K9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a6Q8C6K9 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a6Q8C6K9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Col6a6Q8C6K9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a6Q8C6K9 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Gm12969-201ENSMUST00000120199 1004 ntBASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Gm12516-201ENSMUST00000120819 385 ntBASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Gm12030-201ENSMUST00000121917 223 ntBASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Paupar-201ENSMUST00000194826 3482 ntBASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Gm24891-201ENSMUST00000104391 136 ntBASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Mir6998-201ENSMUST00000183343 64 ntBASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Gm18561-201ENSMUST00000206027 804 ntBASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 AC154184.3-201ENSMUST00000225620 1090 ntBASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a6Q8C6K9 Gm11246-201ENSMUST00000120880 345 ntBASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Gm15566-201ENSMUST00000121130 590 ntBASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a6Q8C6K9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms