Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rft1Q8C3B8 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Gm25261-201ENSMUST00000157416 134 ntBASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Gm9630-201ENSMUST00000178304 885 ntBASIC10.82□□□□□ -0.68
Rft1Q8C3B8 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rft1Q8C3B8 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Gm19309-201ENSMUST00000218295 205 ntBASIC10.81□□□□□ -0.68
Rft1Q8C3B8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rft1Q8C3B8 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms