Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cpsf7Q8BTV2 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf7Q8BTV2 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.12□□□□□ -0.47
Cpsf7Q8BTV2 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf7Q8BTV2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf7Q8BTV2 BC043934-202ENSMUST00000185694 2356 ntBASIC12.12□□□□□ -0.47
Cpsf7Q8BTV2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf7Q8BTV2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf7Q8BTV2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Cpsf7Q8BTV2 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Cog3-203ENSMUST00000227473 4197 ntBASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Gm29127-201ENSMUST00000188304 517 ntBASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Gm45930-201ENSMUST00000221330 292 ntBASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf7Q8BTV2 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Gm7029-201ENSMUST00000173226 450 ntBASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Gm27731-201ENSMUST00000185192 107 ntBASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Gm45784-201ENSMUST00000188360 142 ntBASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Gm8420-201ENSMUST00000097103 598 ntBASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf7Q8BTV2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf7Q8BTV2 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms