Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Arhgef33-207ENSMUST00000224966 490 ntBASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm26047-201ENSMUST00000157308 113 ntBASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm17709-201ENSMUST00000174536 1096 ntBASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm5870-201ENSMUST00000196461 282 ntBASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm26047-202ENSMUST00000198840 115 ntBASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Col16a1Q8BLX7 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Gm12247-201ENSMUST00000117585 670 ntBASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Gm15549-201ENSMUST00000121595 622 ntBASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Gm17214-201ENSMUST00000164501 541 ntBASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Gm42599-201ENSMUST00000201308 469 ntBASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Gm3318-201ENSMUST00000217604 1183 ntBASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col16a1Q8BLX7 Gm11619-201ENSMUST00000117474 237 ntBASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Gm12663-201ENSMUST00000118481 958 ntBASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 161.2 ms