Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Gm12058-201ENSMUST00000118614 437 ntBASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Gm13875-201ENSMUST00000120162 282 ntBASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Rmrp-201ENSMUST00000157463 271 ntBASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Gm27023-201ENSMUST00000182372 285 ntBASIC14.17□□□□□ -0.14
Samm50Q8BGH2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Gm37201-201ENSMUST00000191845 523 ntBASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Gm24255-201ENSMUST00000104481 128 ntBASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Gm11531-201ENSMUST00000117614 555 ntBASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Gm20482-202ENSMUST00000174729 825 ntBASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Gm9022-201ENSMUST00000182482 992 ntBASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Gm27243-201ENSMUST00000183964 521 ntBASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Samm50Q8BGH2 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Samm50Q8BGH2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 260.4 ms