Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Matn2-203ENSMUST00000226766 3252 ntBASIC11.78□□□□□ -0.52
Trim50Q810I2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim50Q810I2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Gm22323-201ENSMUST00000103832 109 ntBASIC11.78□□□□□ -0.52
Trim50Q810I2 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Gm14109-201ENSMUST00000118814 309 ntBASIC11.78□□□□□ -0.52
Trim50Q810I2 Gm14381-201ENSMUST00000122105 414 ntBASIC11.78□□□□□ -0.52
Trim50Q810I2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.78□□□□□ -0.52
Trim50Q810I2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.78□□□□□ -0.52
Trim50Q810I2 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.78□□□□□ -0.52
Trim50Q810I2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim50Q810I2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Trim50Q810I2 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.78□□□□□ -0.52
Trim50Q810I2 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim50Q810I2 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.78□□□□□ -0.52
Trim50Q810I2 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.78□□□□□ -0.52
Trim50Q810I2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trim50Q810I2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.78□□□□□ -0.52
Trim50Q810I2 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trim50Q810I2 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trim50Q810I2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trim50Q810I2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Trim50Q810I2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim50Q810I2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim50Q810I2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim50Q810I2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim50Q810I2 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Trim50Q810I2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim50Q810I2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.77□□□□□ -0.52
Trim50Q810I2 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.77□□□□□ -0.52
Trim50Q810I2 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim50Q810I2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim50Q810I2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim50Q810I2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim50Q810I2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.77□□□□□ -0.53
Trim50Q810I2 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim50Q810I2 Gm7584-201ENSMUST00000175829 940 ntBASIC11.77□□□□□ -0.53
Trim50Q810I2 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim50Q810I2 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.77□□□□□ -0.53
Trim50Q810I2 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.77□□□□□ -0.53
Trim50Q810I2 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim50Q810I2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trim50Q810I2 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
Trim50Q810I2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim50Q810I2 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim50Q810I2 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.76□□□□□ -0.53
Trim50Q810I2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim50Q810I2 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim50Q810I2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim50Q810I2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Trim50Q810I2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trim50Q810I2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim50Q810I2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim50Q810I2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim50Q810I2 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.76□□□□□ -0.53
Trim50Q810I2 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.76□□□□□ -0.53
Trim50Q810I2 Gm13350-201ENSMUST00000120519 479 ntBASIC11.76□□□□□ -0.53
Trim50Q810I2 Gm14247-201ENSMUST00000120950 237 ntBASIC11.76□□□□□ -0.53
Trim50Q810I2 Gm6963-201ENSMUST00000147879 379 ntBASIC11.76□□□□□ -0.53
Trim50Q810I2 Gm20482-202ENSMUST00000174729 825 ntBASIC11.76□□□□□ -0.53
Trim50Q810I2 Gm9230-201ENSMUST00000188228 532 ntBASIC11.76□□□□□ -0.53
Trim50Q810I2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.76□□□□□ -0.53
Trim50Q810I2 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms