Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim62Q80V85 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.5□□□□□ -0.41
Trim62Q80V85 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim62Q80V85 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim62Q80V85 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim62Q80V85 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim62Q80V85 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Trim62Q80V85 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim62Q80V85 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim62Q80V85 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim62Q80V85 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim62Q80V85 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim62Q80V85 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim62Q80V85 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim62Q80V85 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Gm14277-201ENSMUST00000121195 360 ntBASIC12.49□□□□□ -0.41
Trim62Q80V85 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.49□□□□□ -0.41
Trim62Q80V85 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim62Q80V85 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.49□□□□□ -0.41
Trim62Q80V85 Gm2553-201ENSMUST00000215986 605 ntBASIC12.49□□□□□ -0.41
Trim62Q80V85 Gm270-201ENSMUST00000223010 976 ntBASIC12.49□□□□□ -0.41
Trim62Q80V85 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Gm5705-201ENSMUST00000066241 711 ntBASIC12.49□□□□□ -0.41
Trim62Q80V85 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Trim62Q80V85 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim62Q80V85 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Trim62Q80V85 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim62Q80V85 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim62Q80V85 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim62Q80V85 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim62Q80V85 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Gm23949-201ENSMUST00000104027 127 ntBASIC12.48□□□□□ -0.41
Trim62Q80V85 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim62Q80V85 Gm11439-201ENSMUST00000118598 409 ntBASIC12.48□□□□□ -0.41
Trim62Q80V85 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.48□□□□□ -0.41
Trim62Q80V85 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim62Q80V85 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.48□□□□□ -0.41
Trim62Q80V85 Gm37666-201ENSMUST00000194110 866 ntBASIC12.48□□□□□ -0.41
Trim62Q80V85 Gm18056-201ENSMUST00000207670 568 ntBASIC12.48□□□□□ -0.41
Trim62Q80V85 Gm18061-201ENSMUST00000208350 562 ntBASIC12.48□□□□□ -0.41
Trim62Q80V85 Gm18063-201ENSMUST00000208529 568 ntBASIC12.48□□□□□ -0.41
Trim62Q80V85 Gm18052-201ENSMUST00000208750 559 ntBASIC12.48□□□□□ -0.41
Trim62Q80V85 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
Trim62Q80V85 Gm5363-201ENSMUST00000211927 938 ntBASIC12.48□□□□□ -0.41
Trim62Q80V85 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim62Q80V85 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.48□□□□□ -0.41
Trim62Q80V85 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.48□□□□□ -0.41
Trim62Q80V85 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim62Q80V85 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Trim62Q80V85 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim62Q80V85 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.48□□□□□ -0.41
Trim62Q80V85 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim62Q80V85 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Trim62Q80V85 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms