Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Gm12501-201ENSMUST00000119163 529 ntBASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Gm26448-201ENSMUST00000082446 203 ntBASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Gm11331-201ENSMUST00000119764 288 ntBASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Gm8956-201ENSMUST00000203939 825 ntBASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh19Q80TF3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Gm7848-201ENSMUST00000210739 718 ntBASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Gm807-202ENSMUST00000224929 408 ntBASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Gm21811-201ENSMUST00000096485 930 ntBASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms