Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.27□□□□□ -0.61
Pif1Q80SX8 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.27□□□□□ -0.61
Pif1Q80SX8 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.27□□□□□ -0.61
Pif1Q80SX8 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.26□□□□□ -0.61
Pif1Q80SX8 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.26□□□□□ -0.61
Pif1Q80SX8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.26□□□□□ -0.61
Pif1Q80SX8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.26□□□□□ -0.61
Pif1Q80SX8 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm24231-201ENSMUST00000104315 133 ntBASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm12165-201ENSMUST00000117047 342 ntBASIC11.26□□□□□ -0.61
Pif1Q80SX8 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm19459-201ENSMUST00000176240 835 ntBASIC11.26□□□□□ -0.61
Pif1Q80SX8 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm43962-201ENSMUST00000203898 190 ntBASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm5051-201ENSMUST00000204085 485 ntBASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm19994-201ENSMUST00000217086 586 ntBASIC11.26□□□□□ -0.61
Pif1Q80SX8 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.26□□□□□ -0.61
Pif1Q80SX8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.26□□□□□ -0.61
Pif1Q80SX8 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.26□□□□□ -0.61
Pif1Q80SX8 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Pif1Q80SX8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Prr30-201ENSMUST00000057718 1862 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.25□□□□□ -0.61
Pif1Q80SX8 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Gm13035-201ENSMUST00000117496 342 ntBASIC11.25□□□□□ -0.61
Pif1Q80SX8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Gm13045-201ENSMUST00000119019 712 ntBASIC11.25□□□□□ -0.61
Pif1Q80SX8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.25□□□□□ -0.61
Pif1Q80SX8 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Pif1Q80SX8 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.25□□□□□ -0.61
Pif1Q80SX8 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.25□□□□□ -0.61
Pif1Q80SX8 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.25□□□□□ -0.61
Pif1Q80SX8 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pif1Q80SX8 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms