Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
VcanQ62059 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Gm11475-201ENSMUST00000118482 476 ntBASIC11.01□□□□□ -0.65
VcanQ62059 Gm5976-201ENSMUST00000180794 996 ntBASIC11.01□□□□□ -0.65
VcanQ62059 Gm8956-201ENSMUST00000203939 825 ntBASIC11.01□□□□□ -0.65
VcanQ62059 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC11.01□□□□□ -0.65
VcanQ62059 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
VcanQ62059 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.01□□□□□ -0.65
VcanQ62059 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Gm8019-201ENSMUST00000119317 587 ntBASIC11□□□□□ -0.65
VcanQ62059 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC11□□□□□ -0.65
VcanQ62059 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Gm7572-201ENSMUST00000182616 766 ntBASIC11□□□□□ -0.65
VcanQ62059 Mir7088-201ENSMUST00000184227 86 ntBASIC11□□□□□ -0.65
VcanQ62059 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11□□□□□ -0.65
VcanQ62059 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
VcanQ62059 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11□□□□□ -0.65
VcanQ62059 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
VcanQ62059 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11□□□□□ -0.65
VcanQ62059 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Gm24294-201ENSMUST00000158295 277 ntBASIC11□□□□□ -0.65
VcanQ62059 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
VcanQ62059 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11□□□□□ -0.65
VcanQ62059 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
VcanQ62059 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11□□□□□ -0.65
VcanQ62059 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
VcanQ62059 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
VcanQ62059 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11□□□□□ -0.65
VcanQ62059 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
VcanQ62059 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC11□□□□□ -0.65
VcanQ62059 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Gm27444-201ENSMUST00000184157 137 ntBASIC11□□□□□ -0.65
VcanQ62059 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11□□□□□ -0.65
VcanQ62059 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11□□□□□ -0.65
VcanQ62059 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC11□□□□□ -0.65
VcanQ62059 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11□□□□□ -0.65
VcanQ62059 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VcanQ62059 Gm43858-201ENSMUST00000199418 1778 ntBASIC11□□□□□ -0.65
VcanQ62059 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
VcanQ62059 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
VcanQ62059 Gm25492-201ENSMUST00000157383 129 ntBASIC10.99□□□□□ -0.65
VcanQ62059 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC10.99□□□□□ -0.65
VcanQ62059 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.99□□□□□ -0.65
VcanQ62059 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
VcanQ62059 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
VcanQ62059 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.99□□□□□ -0.65
VcanQ62059 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.99□□□□□ -0.65
VcanQ62059 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VcanQ62059 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms