Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ecm1Q61508 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ecm1Q61508 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.32□□□□□ -0.28
Ecm1Q61508 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Ecm1Q61508 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ecm1Q61508 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ecm1Q61508 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.32□□□□□ -0.28
Ecm1Q61508 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ecm1Q61508 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ecm1Q61508 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.32□□□□□ -0.28
Ecm1Q61508 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.32□□□□□ -0.28
Ecm1Q61508 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ecm1Q61508 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.32□□□□□ -0.28
Ecm1Q61508 Gm9136-201ENSMUST00000193368 454 ntBASIC13.32□□□□□ -0.28
Ecm1Q61508 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.32□□□□□ -0.28
Ecm1Q61508 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.32□□□□□ -0.28
Ecm1Q61508 Gm19091-201ENSMUST00000208120 978 ntBASIC13.32□□□□□ -0.28
Ecm1Q61508 Gm8342-201ENSMUST00000209839 757 ntBASIC13.32□□□□□ -0.28
Ecm1Q61508 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.32□□□□□ -0.28
Ecm1Q61508 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.32□□□□□ -0.28
Ecm1Q61508 Gm25517-201ENSMUST00000083865 134 ntBASIC13.32□□□□□ -0.28
Ecm1Q61508 Olfr584-201ENSMUST00000098210 964 ntBASIC13.32□□□□□ -0.28
Ecm1Q61508 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ecm1Q61508 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Ecm1Q61508 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ecm1Q61508 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ecm1Q61508 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ecm1Q61508 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ecm1Q61508 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ecm1Q61508 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ecm1Q61508 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ecm1Q61508 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ecm1Q61508 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ecm1Q61508 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ecm1Q61508 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ecm1Q61508 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ecm1Q61508 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Ecm1Q61508 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.32□□□□□ -0.28
Ecm1Q61508 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ecm1Q61508 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ecm1Q61508 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.31□□□□□ -0.28
Ecm1Q61508 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.31□□□□□ -0.28
Ecm1Q61508 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.31□□□□□ -0.28
Ecm1Q61508 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Ecm1Q61508 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.31□□□□□ -0.28
Ecm1Q61508 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.31□□□□□ -0.28
Ecm1Q61508 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.31□□□□□ -0.28
Ecm1Q61508 Gm8459-201ENSMUST00000162504 760 ntBASIC13.31□□□□□ -0.28
Ecm1Q61508 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Gm37981-201ENSMUST00000194280 535 ntBASIC13.31□□□□□ -0.28
Ecm1Q61508 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.31□□□□□ -0.28
Ecm1Q61508 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ecm1Q61508 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ecm1Q61508 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ecm1Q61508 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.31□□□□□ -0.28
Ecm1Q61508 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ecm1Q61508 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ecm1Q61508 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ecm1Q61508 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ecm1Q61508 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.3□□□□□ -0.28
Ecm1Q61508 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.3□□□□□ -0.28
Ecm1Q61508 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Ecm1Q61508 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ecm1Q61508 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ecm1Q61508 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ecm1Q61508 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ecm1Q61508 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms