Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.56□□□□□ -0.4
Smarcd1Q61466 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Gm15004-201ENSMUST00000119192 630 ntBASIC12.56□□□□□ -0.4
Smarcd1Q61466 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.56□□□□□ -0.4
Smarcd1Q61466 Gm25881-201ENSMUST00000157783 103 ntBASIC12.56□□□□□ -0.4
Smarcd1Q61466 Mir5132-201ENSMUST00000175166 71 ntBASIC12.56□□□□□ -0.4
Smarcd1Q61466 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Gm19287-201ENSMUST00000203190 358 ntBASIC12.56□□□□□ -0.4
Smarcd1Q61466 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Map1b-203ENSMUST00000223725 2669 ntBASIC12.56□□□□□ -0.4
Smarcd1Q61466 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.56□□□□□ -0.4
Smarcd1Q61466 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcd1Q61466 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.55□□□□□ -0.4
Smarcd1Q61466 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Gm15515-201ENSMUST00000117827 822 ntBASIC12.55□□□□□ -0.4
Smarcd1Q61466 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Gm11450-201ENSMUST00000121144 333 ntBASIC12.55□□□□□ -0.4
Smarcd1Q61466 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Smarcd1Q61466 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Gm7848-201ENSMUST00000210739 718 ntBASIC12.55□□□□□ -0.4
Smarcd1Q61466 Gm9797-202ENSMUST00000218003 294 ntBASIC12.55□□□□□ -0.4
Smarcd1Q61466 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.55□□□□□ -0.4
Smarcd1Q61466 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcd1Q61466 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.54□□□□□ -0.4
Smarcd1Q61466 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcd1Q61466 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms