Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.26□□□□□ -0.29
Col11a1Q61245 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.25□□□□□ -0.29
Col11a1Q61245 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Gm15528-201ENSMUST00000117821 864 ntBASIC13.25□□□□□ -0.29
Col11a1Q61245 Gm15196-201ENSMUST00000121406 482 ntBASIC13.25□□□□□ -0.29
Col11a1Q61245 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.25□□□□□ -0.29
Col11a1Q61245 Gm11942-201ENSMUST00000180255 345 ntBASIC13.25□□□□□ -0.29
Col11a1Q61245 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC13.25□□□□□ -0.29
Col11a1Q61245 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Col11a1Q61245 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC13.25□□□□□ -0.29
Col11a1Q61245 Gm43506-201ENSMUST00000200675 753 ntBASIC13.25□□□□□ -0.29
Col11a1Q61245 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.25□□□□□ -0.29
Col11a1Q61245 Gm45135-201ENSMUST00000206787 1184 ntBASIC13.25□□□□□ -0.29
Col11a1Q61245 Gm5599-201ENSMUST00000209602 788 ntBASIC13.25□□□□□ -0.29
Col11a1Q61245 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC13.25□□□□□ -0.29
Col11a1Q61245 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.25□□□□□ -0.29
Col11a1Q61245 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col11a1Q61245 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.25□□□□□ -0.29
Col11a1Q61245 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col11a1Q61245 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col11a1Q61245 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.24□□□□□ -0.29
Col11a1Q61245 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col11a1Q61245 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col11a1Q61245 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col11a1Q61245 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col11a1Q61245 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col11a1Q61245 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col11a1Q61245 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.24□□□□□ -0.29
Col11a1Q61245 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col11a1Q61245 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.24□□□□□ -0.29
Col11a1Q61245 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.24□□□□□ -0.29
Col11a1Q61245 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC13.24□□□□□ -0.29
Col11a1Q61245 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.24□□□□□ -0.29
Col11a1Q61245 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC13.24□□□□□ -0.29
Col11a1Q61245 AC154589.2-201ENSMUST00000228847 251 ntBASIC13.24□□□□□ -0.29
Col11a1Q61245 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col11a1Q61245 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col11a1Q61245 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col11a1Q61245 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col11a1Q61245 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Col11a1Q61245 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Col11a1Q61245 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.24□□□□□ -0.29
Col11a1Q61245 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col11a1Q61245 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col11a1Q61245 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col11a1Q61245 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col11a1Q61245 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col11a1Q61245 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col11a1Q61245 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.23□□□□□ -0.29
Col11a1Q61245 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.23□□□□□ -0.29
Col11a1Q61245 Gm12036-201ENSMUST00000120008 530 ntBASIC13.23□□□□□ -0.29
Col11a1Q61245 Gm11960-201ENSMUST00000122068 925 ntBASIC13.23□□□□□ -0.29
Col11a1Q61245 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Gm9369-201ENSMUST00000196009 733 ntBASIC13.23□□□□□ -0.29
Col11a1Q61245 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Gm43249-201ENSMUST00000200464 458 ntBASIC13.23□□□□□ -0.29
Col11a1Q61245 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Gm5449-201ENSMUST00000081132 357 ntBASIC13.23□□□□□ -0.29
Col11a1Q61245 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Col11a1Q61245 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.23□□□□□ -0.29
Col11a1Q61245 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col11a1Q61245 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.23□□□□□ -0.29
Col11a1Q61245 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.23□□□□□ -0.29
Col11a1Q61245 Gm14005-210ENSMUST00000225087 1413 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms