Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
ClpbQ60649 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.62□□□□□ -0.55
ClpbQ60649 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.62□□□□□ -0.55
ClpbQ60649 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
ClpbQ60649 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ClpbQ60649 Gm13665-201ENSMUST00000120830 528 ntBASIC11.62□□□□□ -0.55
ClpbQ60649 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.62□□□□□ -0.55
ClpbQ60649 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Gm38317-201ENSMUST00000195564 343 ntBASIC11.62□□□□□ -0.55
ClpbQ60649 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.62□□□□□ -0.55
ClpbQ60649 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.62□□□□□ -0.55
ClpbQ60649 Gm8712-201ENSMUST00000221090 701 ntBASIC11.62□□□□□ -0.55
ClpbQ60649 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
ClpbQ60649 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ClpbQ60649 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
ClpbQ60649 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
ClpbQ60649 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
ClpbQ60649 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
ClpbQ60649 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.62□□□□□ -0.55
ClpbQ60649 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ClpbQ60649 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.62□□□□□ -0.55
ClpbQ60649 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.62□□□□□ -0.55
ClpbQ60649 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
ClpbQ60649 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClpbQ60649 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
ClpbQ60649 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
ClpbQ60649 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.61□□□□□ -0.55
ClpbQ60649 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
ClpbQ60649 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.61□□□□□ -0.55
ClpbQ60649 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ClpbQ60649 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ClpbQ60649 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
ClpbQ60649 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
ClpbQ60649 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ClpbQ60649 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
ClpbQ60649 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.61□□□□□ -0.55
ClpbQ60649 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.61□□□□□ -0.55
ClpbQ60649 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.61□□□□□ -0.55
ClpbQ60649 Gm29199-201ENSMUST00000187766 775 ntBASIC11.61□□□□□ -0.55
ClpbQ60649 Gm18304-201ENSMUST00000189162 546 ntBASIC11.61□□□□□ -0.55
ClpbQ60649 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.61□□□□□ -0.55
ClpbQ60649 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.61□□□□□ -0.55
ClpbQ60649 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ClpbQ60649 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClpbQ60649 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ClpbQ60649 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
ClpbQ60649 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClpbQ60649 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms