Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prdm1Q60636 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prdm1Q60636 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prdm1Q60636 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prdm1Q60636 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Prdm1Q60636 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prdm1Q60636 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prdm1Q60636 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prdm1Q60636 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prdm1Q60636 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prdm1Q60636 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prdm1Q60636 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.09□□□□□ -0.15
Prdm1Q60636 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prdm1Q60636 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Prdm1Q60636 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prdm1Q60636 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Prdm1Q60636 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prdm1Q60636 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prdm1Q60636 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Prdm1Q60636 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Prdm1Q60636 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.08□□□□□ -0.15
Prdm1Q60636 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prdm1Q60636 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.08□□□□□ -0.15
Prdm1Q60636 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Prdm1Q60636 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prdm1Q60636 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prdm1Q60636 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prdm1Q60636 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prdm1Q60636 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.08□□□□□ -0.16
Prdm1Q60636 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prdm1Q60636 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prdm1Q60636 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prdm1Q60636 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prdm1Q60636 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.08□□□□□ -0.16
Prdm1Q60636 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.08□□□□□ -0.16
Prdm1Q60636 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prdm1Q60636 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Prdm1Q60636 Gm12380-201ENSMUST00000119012 544 ntBASIC14.08□□□□□ -0.16
Prdm1Q60636 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.08□□□□□ -0.16
Prdm1Q60636 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.08□□□□□ -0.16
Prdm1Q60636 Gm24990-201ENSMUST00000157406 323 ntBASIC14.08□□□□□ -0.16
Prdm1Q60636 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prdm1Q60636 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.08□□□□□ -0.16
Prdm1Q60636 Gm27627-201ENSMUST00000183644 150 ntBASIC14.08□□□□□ -0.16
Prdm1Q60636 Gm29199-201ENSMUST00000187766 775 ntBASIC14.08□□□□□ -0.16
Prdm1Q60636 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.08□□□□□ -0.16
Prdm1Q60636 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.08□□□□□ -0.16
Prdm1Q60636 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prdm1Q60636 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prdm1Q60636 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prdm1Q60636 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prdm1Q60636 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prdm1Q60636 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.08□□□□□ -0.16
Prdm1Q60636 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prdm1Q60636 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prdm1Q60636 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.08□□□□□ -0.16
Prdm1Q60636 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prdm1Q60636 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Prdm1Q60636 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.07□□□□□ -0.16
Prdm1Q60636 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Prdm1Q60636 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prdm1Q60636 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prdm1Q60636 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prdm1Q60636 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prdm1Q60636 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prdm1Q60636 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prdm1Q60636 Gm15711-201ENSMUST00000118889 535 ntBASIC14.07□□□□□ -0.16
Prdm1Q60636 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.07□□□□□ -0.16
Prdm1Q60636 Gm27530-201ENSMUST00000184096 98 ntBASIC14.07□□□□□ -0.16
Prdm1Q60636 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.07□□□□□ -0.16
Prdm1Q60636 AY036118-201ENSMUST00000200021 923 ntBASIC14.07□□□□□ -0.16
Prdm1Q60636 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.07□□□□□ -0.16
Prdm1Q60636 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.07□□□□□ -0.16
Prdm1Q60636 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prdm1Q60636 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prdm1Q60636 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prdm1Q60636 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prdm1Q60636 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prdm1Q60636 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Prdm1Q60636 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prdm1Q60636 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prdm1Q60636 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.07□□□□□ -0.16
Prdm1Q60636 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prdm1Q60636 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prdm1Q60636 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prdm1Q60636 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.07□□□□□ -0.16
Prdm1Q60636 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.07□□□□□ -0.16
Prdm1Q60636 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Prdm1Q60636 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.06□□□□□ -0.16
Prdm1Q60636 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Prdm1Q60636 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.06□□□□□ -0.16
Prdm1Q60636 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Prdm1Q60636 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms