Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm12241-201ENSMUST00000118330 726 ntBASIC11.94□□□□□ -0.5
Scn2bQ56A07 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Gm13316-201ENSMUST00000140537 691 ntBASIC11.94□□□□□ -0.5
Scn2bQ56A07 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.94□□□□□ -0.5
Scn2bQ56A07 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Gm27501-201ENSMUST00000183599 107 ntBASIC11.94□□□□□ -0.5
Scn2bQ56A07 Gm43118-201ENSMUST00000199149 775 ntBASIC11.94□□□□□ -0.5
Scn2bQ56A07 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Gm45331-201ENSMUST00000209868 554 ntBASIC11.94□□□□□ -0.5
Scn2bQ56A07 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Olfr582-201ENSMUST00000098212 960 ntBASIC11.94□□□□□ -0.5
Scn2bQ56A07 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Gm15370-201ENSMUST00000117158 253 ntBASIC11.93□□□□□ -0.5
Scn2bQ56A07 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Olfr284-202ENSMUST00000206647 966 ntBASIC11.93□□□□□ -0.5
Scn2bQ56A07 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Gm9368-201ENSMUST00000219348 831 ntBASIC11.93□□□□□ -0.5
Scn2bQ56A07 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn2bQ56A07 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn2bQ56A07 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.92□□□□□ -0.5
Scn2bQ56A07 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Scn2bQ56A07 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn2bQ56A07 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn2bQ56A07 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn2bQ56A07 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn2bQ56A07 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn2bQ56A07 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.92□□□□□ -0.5
Scn2bQ56A07 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scn2bQ56A07 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Scn2bQ56A07 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scn2bQ56A07 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Scn2bQ56A07 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn2bQ56A07 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.92□□□□□ -0.5
Scn2bQ56A07 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn2bQ56A07 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Scn2bQ56A07 Gm13875-201ENSMUST00000120162 282 ntBASIC11.92□□□□□ -0.5
Scn2bQ56A07 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Scn2bQ56A07 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.92□□□□□ -0.5
Scn2bQ56A07 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms