Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm1Q52KI8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm1Q52KI8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm1Q52KI8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm1Q52KI8 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Srrm1Q52KI8 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Srrm1Q52KI8 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Srrm1Q52KI8 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm1Q52KI8 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm1Q52KI8 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm1Q52KI8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm1Q52KI8 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.56□□□□□ -0.24
Srrm1Q52KI8 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm1Q52KI8 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Gm13600-201ENSMUST00000117949 744 ntBASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Gm11836-201ENSMUST00000121022 441 ntBASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Gm17877-201ENSMUST00000192578 814 ntBASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm1Q52KI8 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Gm25076-201ENSMUST00000104098 132 ntBASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Gm23045-201ENSMUST00000175041 96 ntBASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Gm18367-201ENSMUST00000176139 600 ntBASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm1Q52KI8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms