Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Gm25214-201ENSMUST00000104573 129 ntBASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Gm9083-201ENSMUST00000120423 819 ntBASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Gm20482-202ENSMUST00000174729 825 ntBASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Syne3Q4FZC9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Syne3Q4FZC9 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Syne3Q4FZC9 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Gm3096-201ENSMUST00000185770 364 ntBASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Syne3Q4FZC9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.83□□□□□ -0.36
Syne3Q4FZC9 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Gm23270-201ENSMUST00000104055 131 ntBASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Gm24255-201ENSMUST00000104481 128 ntBASIC12.82□□□□□ -0.36
Syne3Q4FZC9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms