Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Gm42627-201ENSMUST00000197347 224 ntBASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Gm14441-201ENSMUST00000121960 540 ntBASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Gm5950-201ENSMUST00000213337 772 ntBASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Cog3-203ENSMUST00000227473 4197 ntBASIC12.66□□□□□ -0.38
Cul4aQ3TCH7 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Gm6023-201ENSMUST00000118217 606 ntBASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Gm15610-201ENSMUST00000120584 195 ntBASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Gm37008-201ENSMUST00000195712 319 ntBASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cul4aQ3TCH7 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cul4aQ3TCH7 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms