Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col19a1Q0VF58 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col19a1Q0VF58 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col19a1Q0VF58 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Col19a1Q0VF58 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Col19a1Q0VF58 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Col19a1Q0VF58 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Col19a1Q0VF58 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.83□□□□□ -0.36
Col19a1Q0VF58 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col19a1Q0VF58 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.82□□□□□ -0.36
Col19a1Q0VF58 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Gm12906-201ENSMUST00000154610 441 ntBASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.82□□□□□ -0.36
Col19a1Q0VF58 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Col19a1Q0VF58 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Gm13286-201ENSMUST00000117750 537 ntBASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Gm13204-201ENSMUST00000120110 821 ntBASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 AC121357.1-201ENSMUST00000227365 608 ntBASIC12.81□□□□□ -0.36
Col19a1Q0VF58 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Gm9791-201ENSMUST00000060997 447 ntBASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col19a1Q0VF58 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms