Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.18□□□□□ -0.62
Cacna1aP97445 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.18□□□□□ -0.62
Cacna1aP97445 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cacna1aP97445 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Cacna1aP97445 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Cacna1aP97445 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Cacna1aP97445 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cacna1aP97445 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
Cacna1aP97445 Gm9507-202ENSMUST00000180157 654 ntBASIC11.17□□□□□ -0.62
Cacna1aP97445 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Gm45594-201ENSMUST00000211717 241 ntBASIC11.17□□□□□ -0.62
Cacna1aP97445 Gm9797-202ENSMUST00000218003 294 ntBASIC11.17□□□□□ -0.62
Cacna1aP97445 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Cacna1aP97445 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.17□□□□□ -0.62
Cacna1aP97445 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cacna1aP97445 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cacna1aP97445 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cacna1aP97445 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cacna1aP97445 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cacna1aP97445 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.17□□□□□ -0.62
Cacna1aP97445 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Cacna1aP97445 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cacna1aP97445 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.17□□□□□ -0.62
Cacna1aP97445 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.17□□□□□ -0.62
Cacna1aP97445 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.17□□□□□ -0.62
Cacna1aP97445 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cacna1aP97445 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cacna1aP97445 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Cacna1aP97445 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.16□□□□□ -0.62
Cacna1aP97445 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cacna1aP97445 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cacna1aP97445 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.16□□□□□ -0.62
Cacna1aP97445 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Gm5705-201ENSMUST00000066241 711 ntBASIC11.16□□□□□ -0.62
Cacna1aP97445 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cacna1aP97445 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.16□□□□□ -0.62
Cacna1aP97445 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cacna1aP97445 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cacna1aP97445 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cacna1aP97445 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms