Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SgcdP82347 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.26□□□□□ -0.61
SgcdP82347 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
SgcdP82347 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcdP82347 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcdP82347 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SgcdP82347 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SgcdP82347 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SgcdP82347 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
SgcdP82347 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SgcdP82347 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Gm12291-201ENSMUST00000121627 311 ntBASIC11.25□□□□□ -0.61
SgcdP82347 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.25□□□□□ -0.61
SgcdP82347 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.25□□□□□ -0.61
SgcdP82347 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.25□□□□□ -0.61
SgcdP82347 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.25□□□□□ -0.61
SgcdP82347 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.25□□□□□ -0.61
SgcdP82347 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
SgcdP82347 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.25□□□□□ -0.61
SgcdP82347 Gm38266-201ENSMUST00000194931 421 ntBASIC11.25□□□□□ -0.61
SgcdP82347 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.25□□□□□ -0.61
SgcdP82347 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.25□□□□□ -0.61
SgcdP82347 Gm43822-201ENSMUST00000200285 476 ntBASIC11.25□□□□□ -0.61
SgcdP82347 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.25□□□□□ -0.61
SgcdP82347 Gm8227-201ENSMUST00000223306 571 ntBASIC11.25□□□□□ -0.61
SgcdP82347 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Gm10012-201ENSMUST00000078252 192 ntBASIC11.25□□□□□ -0.61
SgcdP82347 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.25□□□□□ -0.61
SgcdP82347 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
SgcdP82347 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SgcdP82347 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.25□□□□□ -0.61
SgcdP82347 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
SgcdP82347 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.25□□□□□ -0.61
SgcdP82347 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
SgcdP82347 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SgcdP82347 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
SgcdP82347 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SgcdP82347 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SgcdP82347 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SgcdP82347 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.24□□□□□ -0.61
SgcdP82347 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SgcdP82347 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.24□□□□□ -0.61
SgcdP82347 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.24□□□□□ -0.61
SgcdP82347 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SgcdP82347 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.24□□□□□ -0.61
SgcdP82347 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.24□□□□□ -0.61
SgcdP82347 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.24□□□□□ -0.61
SgcdP82347 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.24□□□□□ -0.61
SgcdP82347 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcdP82347 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SgcdP82347 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SgcdP82347 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SgcdP82347 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms