Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Shox2P70390 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.91□□□□□ -0.5
Shox2P70390 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.91□□□□□ -0.5
Shox2P70390 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.91□□□□□ -0.5
Shox2P70390 Gm27306-201ENSMUST00000183970 107 ntBASIC11.91□□□□□ -0.5
Shox2P70390 Gm27702-201ENSMUST00000184512 56 ntBASIC11.91□□□□□ -0.5
Shox2P70390 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.91□□□□□ -0.5
Shox2P70390 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.91□□□□□ -0.5
Shox2P70390 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.91□□□□□ -0.5
Shox2P70390 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.91□□□□□ -0.5
Shox2P70390 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Shox2P70390 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
Shox2P70390 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Shox2P70390 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.91□□□□□ -0.5
Shox2P70390 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shox2P70390 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Shox2P70390 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.9□□□□□ -0.5
Shox2P70390 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.9□□□□□ -0.5
Shox2P70390 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Shox2P70390 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.9□□□□□ -0.5
Shox2P70390 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Shox2P70390 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Shox2P70390 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Shox2P70390 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.9□□□□□ -0.5
Shox2P70390 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Gm12314-201ENSMUST00000118104 538 ntBASIC11.9□□□□□ -0.5
Shox2P70390 Gm14057-201ENSMUST00000120631 482 ntBASIC11.9□□□□□ -0.5
Shox2P70390 Gm11594-201ENSMUST00000122313 162 ntBASIC11.9□□□□□ -0.5
Shox2P70390 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.9□□□□□ -0.5
Shox2P70390 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.9□□□□□ -0.5
Shox2P70390 Gm15429-201ENSMUST00000151268 798 ntBASIC11.9□□□□□ -0.5
Shox2P70390 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.9□□□□□ -0.5
Shox2P70390 Gm24694-201ENSMUST00000180054 110 ntBASIC11.9□□□□□ -0.5
Shox2P70390 Gm27663-201ENSMUST00000184839 110 ntBASIC11.9□□□□□ -0.5
Shox2P70390 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Shox2P70390 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.9□□□□□ -0.5
Shox2P70390 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.9□□□□□ -0.5
Shox2P70390 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.9□□□□□ -0.5
Shox2P70390 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Shox2P70390 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Shox2P70390 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shox2P70390 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.9□□□□□ -0.51
Shox2P70390 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.9□□□□□ -0.51
Shox2P70390 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.9□□□□□ -0.51
Shox2P70390 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.9□□□□□ -0.51
Shox2P70390 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Shox2P70390 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.89□□□□□ -0.51
Shox2P70390 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.89□□□□□ -0.51
Shox2P70390 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.89□□□□□ -0.51
Shox2P70390 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Shox2P70390 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Shox2P70390 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.89□□□□□ -0.51
Shox2P70390 Gm15487-201ENSMUST00000122373 465 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms