Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.62□□□□□ -0.71
Lsm6P62313 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Lsm6P62313 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.62□□□□□ -0.71
Lsm6P62313 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.62□□□□□ -0.71
Lsm6P62313 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.62□□□□□ -0.71
Lsm6P62313 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.62□□□□□ -0.71
Lsm6P62313 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Lsm6P62313 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Lsm6P62313 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.62□□□□□ -0.71
Lsm6P62313 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Gm14644-201ENSMUST00000116671 647 ntBASIC10.62□□□□□ -0.71
Lsm6P62313 Gm12015-201ENSMUST00000117065 843 ntBASIC10.62□□□□□ -0.71
Lsm6P62313 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.62□□□□□ -0.71
Lsm6P62313 Gm15610-201ENSMUST00000120584 195 ntBASIC10.62□□□□□ -0.71
Lsm6P62313 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.62□□□□□ -0.71
Lsm6P62313 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.62□□□□□ -0.71
Lsm6P62313 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.62□□□□□ -0.71
Lsm6P62313 Gm9230-201ENSMUST00000188228 532 ntBASIC10.62□□□□□ -0.71
Lsm6P62313 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.62□□□□□ -0.71
Lsm6P62313 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.62□□□□□ -0.71
Lsm6P62313 Gm38241-201ENSMUST00000192641 898 ntBASIC10.62□□□□□ -0.71
Lsm6P62313 Gm31256-201ENSMUST00000194705 506 ntBASIC10.62□□□□□ -0.71
Lsm6P62313 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.62□□□□□ -0.71
Lsm6P62313 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.62□□□□□ -0.71
Lsm6P62313 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.62□□□□□ -0.71
Lsm6P62313 Gm8712-201ENSMUST00000221090 701 ntBASIC10.62□□□□□ -0.71
Lsm6P62313 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.62□□□□□ -0.71
Lsm6P62313 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Lsm6P62313 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Lsm6P62313 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Lsm6P62313 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.62□□□□□ -0.71
Lsm6P62313 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm6P62313 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Lsm6P62313 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Lsm6P62313 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Lsm6P62313 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.61□□□□□ -0.71
Lsm6P62313 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.61□□□□□ -0.71
Lsm6P62313 Gm11930-201ENSMUST00000117788 190 ntBASIC10.61□□□□□ -0.71
Lsm6P62313 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.61□□□□□ -0.71
Lsm6P62313 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.61□□□□□ -0.71
Lsm6P62313 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Lsm6P62313 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Lsm6P62313 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.61□□□□□ -0.71
Lsm6P62313 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Gm6621-201ENSMUST00000193251 772 ntBASIC10.61□□□□□ -0.71
Lsm6P62313 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.61□□□□□ -0.71
Lsm6P62313 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.61□□□□□ -0.71
Lsm6P62313 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.61□□□□□ -0.71
Lsm6P62313 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Lsm6P62313 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Lsm6P62313 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.61□□□□□ -0.71
Lsm6P62313 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.61□□□□□ -0.71
Lsm6P62313 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.61□□□□□ -0.71
Lsm6P62313 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Lsm6P62313 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Lsm6P62313 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.61□□□□□ -0.71
Lsm6P62313 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm6P62313 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.6□□□□□ -0.71
Lsm6P62313 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm6P62313 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm6P62313 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm6P62313 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm6P62313 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.6□□□□□ -0.71
Lsm6P62313 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms