Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.93□□□□□ -0.66
Vbp1P61759 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Vbp1P61759 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Vbp1P61759 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Vbp1P61759 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.93□□□□□ -0.66
Vbp1P61759 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Vbp1P61759 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.93□□□□□ -0.66
Vbp1P61759 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.93□□□□□ -0.66
Vbp1P61759 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Vbp1P61759 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vbp1P61759 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Vbp1P61759 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.92□□□□□ -0.66
Vbp1P61759 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Vbp1P61759 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Vbp1P61759 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.92□□□□□ -0.66
Vbp1P61759 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Vbp1P61759 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Vbp1P61759 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Vbp1P61759 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.92□□□□□ -0.66
Vbp1P61759 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Vbp1P61759 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.92□□□□□ -0.66
Vbp1P61759 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Vbp1P61759 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Vbp1P61759 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.92□□□□□ -0.66
Vbp1P61759 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Vbp1P61759 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Vbp1P61759 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.92□□□□□ -0.66
Vbp1P61759 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Vbp1P61759 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.92□□□□□ -0.66
Vbp1P61759 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Vbp1P61759 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Vbp1P61759 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Vbp1P61759 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.92□□□□□ -0.66
Vbp1P61759 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.92□□□□□ -0.66
Vbp1P61759 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Vbp1P61759 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vbp1P61759 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Vbp1P61759 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Vbp1P61759 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Vbp1P61759 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Vbp1P61759 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.91□□□□□ -0.66
Vbp1P61759 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Vbp1P61759 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.91□□□□□ -0.66
Vbp1P61759 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.91□□□□□ -0.66
Vbp1P61759 Rmrp-201ENSMUST00000157463 271 ntBASIC10.91□□□□□ -0.66
Vbp1P61759 Gm21854-201ENSMUST00000179901 471 ntBASIC10.91□□□□□ -0.66
Vbp1P61759 Gm9022-201ENSMUST00000182482 992 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms