Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Tpm1P58771 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.46□□□□□ -0.25
Tpm1P58771 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC13.46□□□□□ -0.25
Tpm1P58771 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Tpm1P58771 Gm12363-201ENSMUST00000122250 668 ntBASIC13.46□□□□□ -0.25
Tpm1P58771 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.46□□□□□ -0.25
Tpm1P58771 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.46□□□□□ -0.25
Tpm1P58771 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.46□□□□□ -0.25
Tpm1P58771 Gm17794-201ENSMUST00000220252 955 ntBASIC13.46□□□□□ -0.25
Tpm1P58771 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.46□□□□□ -0.25
Tpm1P58771 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 AC124577.2-201ENSMUST00000217413 2420 ntBASIC13.46□□□□□ -0.25
Tpm1P58771 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC13.46□□□□□ -0.25
Tpm1P58771 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Tpm1P58771 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm1P58771 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Tpm1P58771 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Tpm1P58771 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.46□□□□□ -0.26
Tpm1P58771 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tpm1P58771 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.46□□□□□ -0.26
Tpm1P58771 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tpm1P58771 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Tpm1P58771 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tpm1P58771 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.45□□□□□ -0.26
Tpm1P58771 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC13.45□□□□□ -0.26
Tpm1P58771 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Gm11964-201ENSMUST00000120982 444 ntBASIC13.45□□□□□ -0.26
Tpm1P58771 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Gm5866-201ENSMUST00000177881 973 ntBASIC13.45□□□□□ -0.26
Tpm1P58771 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Gm8515-201ENSMUST00000194852 576 ntBASIC13.45□□□□□ -0.26
Tpm1P58771 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.45□□□□□ -0.26
Tpm1P58771 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Tpm1P58771 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.45□□□□□ -0.26
Tpm1P58771 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Tpm1P58771 Gm5356-201ENSMUST00000093326 615 ntBASIC13.45□□□□□ -0.26
Tpm1P58771 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Tpm1P58771 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.45□□□□□ -0.26
Tpm1P58771 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.45□□□□□ -0.26
Tpm1P58771 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Tpm1P58771 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm1P58771 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Tpm1P58771 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.44□□□□□ -0.26
Tpm1P58771 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.44□□□□□ -0.26
Tpm1P58771 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Tpm1P58771 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.44□□□□□ -0.26
Tpm1P58771 Gm11918-201ENSMUST00000121660 179 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 114.1 ms