Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.38□□□□□ -0.43
ClgnP52194 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClgnP52194 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClgnP52194 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClgnP52194 Gm12957-201ENSMUST00000117835 377 ntBASIC12.38□□□□□ -0.43
ClgnP52194 Gm13786-201ENSMUST00000122371 333 ntBASIC12.38□□□□□ -0.43
ClgnP52194 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClgnP52194 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
ClgnP52194 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.38□□□□□ -0.43
ClgnP52194 Mir7085-201ENSMUST00000184353 66 ntBASIC12.38□□□□□ -0.43
ClgnP52194 Gm43118-201ENSMUST00000199149 775 ntBASIC12.38□□□□□ -0.43
ClgnP52194 Gm44958-201ENSMUST00000203734 736 ntBASIC12.38□□□□□ -0.43
ClgnP52194 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.38□□□□□ -0.43
ClgnP52194 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.38□□□□□ -0.43
ClgnP52194 Gm6013-201ENSMUST00000212264 699 ntBASIC12.38□□□□□ -0.43
ClgnP52194 Gm7046-201ENSMUST00000221351 977 ntBASIC12.38□□□□□ -0.43
ClgnP52194 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.38□□□□□ -0.43
ClgnP52194 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClgnP52194 Gm10076-201ENSMUST00000073238 384 ntBASIC12.38□□□□□ -0.43
ClgnP52194 Gm10478-201ENSMUST00000084451 396 ntBASIC12.38□□□□□ -0.43
ClgnP52194 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
ClgnP52194 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClgnP52194 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClgnP52194 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClgnP52194 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClgnP52194 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
ClgnP52194 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
ClgnP52194 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.38□□□□□ -0.43
ClgnP52194 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClgnP52194 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.38□□□□□ -0.43
ClgnP52194 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClgnP52194 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ClgnP52194 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ClgnP52194 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClgnP52194 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClgnP52194 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
ClgnP52194 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClgnP52194 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.38□□□□□ -0.43
ClgnP52194 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClgnP52194 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClgnP52194 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
ClgnP52194 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ClgnP52194 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.37□□□□□ -0.43
ClgnP52194 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ClgnP52194 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.37□□□□□ -0.43
ClgnP52194 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.37□□□□□ -0.43
ClgnP52194 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
ClgnP52194 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ClgnP52194 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.37□□□□□ -0.43
ClgnP52194 Gm18304-201ENSMUST00000189162 546 ntBASIC12.37□□□□□ -0.43
ClgnP52194 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.37□□□□□ -0.43
ClgnP52194 Gm42693-201ENSMUST00000196779 631 ntBASIC12.37□□□□□ -0.43
ClgnP52194 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.37□□□□□ -0.43
ClgnP52194 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ClgnP52194 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ClgnP52194 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ClgnP52194 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ClgnP52194 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ClgnP52194 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ClgnP52194 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ClgnP52194 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ClgnP52194 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClgnP52194 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClgnP52194 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClgnP52194 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ClgnP52194 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClgnP52194 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
ClgnP52194 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClgnP52194 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClgnP52194 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClgnP52194 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ClgnP52194 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClgnP52194 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClgnP52194 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClgnP52194 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClgnP52194 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClgnP52194 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClgnP52194 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClgnP52194 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClgnP52194 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClgnP52194 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms