Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdx2P43241 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.47□□□□□ -0.57
Cdx2P43241 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Cdx2P43241 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cdx2P43241 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdx2P43241 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Cdx2P43241 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.46□□□□□ -0.57
Cdx2P43241 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cdx2P43241 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.46□□□□□ -0.57
Cdx2P43241 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Cdx2P43241 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdx2P43241 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cdx2P43241 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdx2P43241 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdx2P43241 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdx2P43241 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cdx2P43241 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdx2P43241 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdx2P43241 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdx2P43241 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdx2P43241 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Cdx2P43241 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cdx2P43241 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.46□□□□□ -0.57
Cdx2P43241 Gm16166-201ENSMUST00000118291 787 ntBASIC11.46□□□□□ -0.57
Cdx2P43241 Gm12628-201ENSMUST00000122193 382 ntBASIC11.46□□□□□ -0.57
Cdx2P43241 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.46□□□□□ -0.57
Cdx2P43241 Gm24844-201ENSMUST00000158679 127 ntBASIC11.46□□□□□ -0.57
Cdx2P43241 Gm25951-201ENSMUST00000175330 64 ntBASIC11.46□□□□□ -0.57
Cdx2P43241 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.46□□□□□ -0.57
Cdx2P43241 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdx2P43241 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Cdx2P43241 Gm4034-201ENSMUST00000187674 480 ntBASIC11.46□□□□□ -0.57
Cdx2P43241 Gm3551-201ENSMUST00000190750 664 ntBASIC11.46□□□□□ -0.57
Cdx2P43241 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cdx2P43241 Gm38117-201ENSMUST00000194653 939 ntBASIC11.46□□□□□ -0.57
Cdx2P43241 Gm19091-201ENSMUST00000208120 978 ntBASIC11.46□□□□□ -0.57
Cdx2P43241 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.46□□□□□ -0.57
Cdx2P43241 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.46□□□□□ -0.57
Cdx2P43241 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdx2P43241 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdx2P43241 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdx2P43241 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdx2P43241 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdx2P43241 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdx2P43241 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdx2P43241 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.46□□□□□ -0.58
Cdx2P43241 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdx2P43241 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdx2P43241 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdx2P43241 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdx2P43241 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdx2P43241 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cdx2P43241 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.46□□□□□ -0.58
Cdx2P43241 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdx2P43241 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.46□□□□□ -0.58
Cdx2P43241 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Cdx2P43241 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cdx2P43241 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdx2P43241 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Cdx2P43241 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cdx2P43241 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdx2P43241 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdx2P43241 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.45□□□□□ -0.58
Cdx2P43241 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Cdx2P43241 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cdx2P43241 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cdx2P43241 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Gm15610-201ENSMUST00000120584 195 ntBASIC11.45□□□□□ -0.58
Cdx2P43241 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdx2P43241 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.45□□□□□ -0.58
Cdx2P43241 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.45□□□□□ -0.58
Cdx2P43241 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.45□□□□□ -0.58
Cdx2P43241 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.45□□□□□ -0.58
Cdx2P43241 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Gm44506-201ENSMUST00000206278 965 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms