Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cxcl12P40224 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcl12P40224 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cxcl12P40224 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cxcl12P40224 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cxcl12P40224 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Cxcl12P40224 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.4□□□□□ -0.43
Cxcl12P40224 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.4□□□□□ -0.43
Cxcl12P40224 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Cxcl12P40224 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cxcl12P40224 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cxcl12P40224 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.39□□□□□ -0.43
Cxcl12P40224 Gm24248-201ENSMUST00000157321 322 ntBASIC12.39□□□□□ -0.43
Cxcl12P40224 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.39□□□□□ -0.43
Cxcl12P40224 Gm17214-201ENSMUST00000164501 541 ntBASIC12.39□□□□□ -0.43
Cxcl12P40224 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Cxcl12P40224 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.39□□□□□ -0.43
Cxcl12P40224 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.39□□□□□ -0.43
Cxcl12P40224 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.39□□□□□ -0.43
Cxcl12P40224 BC106175-202ENSMUST00000219344 1213 ntBASIC12.39□□□□□ -0.43
Cxcl12P40224 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.39□□□□□ -0.43
Cxcl12P40224 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cxcl12P40224 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cxcl12P40224 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Cxcl12P40224 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Cxcl12P40224 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Cxcl12P40224 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl12P40224 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.38□□□□□ -0.43
Cxcl12P40224 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.38□□□□□ -0.43
Cxcl12P40224 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Cxcl12P40224 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cxcl12P40224 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.38□□□□□ -0.43
Cxcl12P40224 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cxcl12P40224 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cxcl12P40224 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Cxcl12P40224 Gm12274-201ENSMUST00000120062 385 ntBASIC12.38□□□□□ -0.43
Cxcl12P40224 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.38□□□□□ -0.43
Cxcl12P40224 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.38□□□□□ -0.43
Cxcl12P40224 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.38□□□□□ -0.43
Cxcl12P40224 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.38□□□□□ -0.43
Cxcl12P40224 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.38□□□□□ -0.43
Cxcl12P40224 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Trav11n-201ENSMUST00000200113 343 ntBASIC12.38□□□□□ -0.43
Cxcl12P40224 Gm18561-201ENSMUST00000206027 804 ntBASIC12.38□□□□□ -0.43
Cxcl12P40224 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.38□□□□□ -0.43
Cxcl12P40224 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cxcl12P40224 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cxcl12P40224 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Cxcl12P40224 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.38□□□□□ -0.43
Cxcl12P40224 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Cxcl12P40224 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Cxcl12P40224 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl12P40224 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.37□□□□□ -0.43
Cxcl12P40224 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms