Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Mir1938-201ENSMUST00000158746 100 ntBASIC12.17□□□□□ -0.46
Fen1P39749 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Gm35960-201ENSMUST00000202712 767 ntBASIC12.17□□□□□ -0.46
Fen1P39749 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.17□□□□□ -0.46
Fen1P39749 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Fen1P39749 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.17□□□□□ -0.46
Fen1P39749 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.17□□□□□ -0.46
Fen1P39749 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.17□□□□□ -0.46
Fen1P39749 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Fen1P39749 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.17□□□□□ -0.46
Fen1P39749 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.17□□□□□ -0.46
Fen1P39749 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fen1P39749 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Fen1P39749 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Fen1P39749 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.16□□□□□ -0.46
Fen1P39749 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Fen1P39749 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Gm12363-201ENSMUST00000122250 668 ntBASIC12.16□□□□□ -0.46
Fen1P39749 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Gm32025-201ENSMUST00000217960 307 ntBASIC12.16□□□□□ -0.46
Fen1P39749 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.16□□□□□ -0.46
Fen1P39749 Gm9899-201ENSMUST00000065519 555 ntBASIC12.16□□□□□ -0.46
Fen1P39749 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.16□□□□□ -0.46
Fen1P39749 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Fen1P39749 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fen1P39749 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.15□□□□□ -0.46
Fen1P39749 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.15□□□□□ -0.46
Fen1P39749 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Fen1P39749 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Fen1P39749 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.15□□□□□ -0.46
Fen1P39749 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Fen1P39749 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.15□□□□□ -0.46
Fen1P39749 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Fen1P39749 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.15□□□□□ -0.46
Fen1P39749 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.15□□□□□ -0.46
Fen1P39749 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.15□□□□□ -0.46
Fen1P39749 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.15□□□□□ -0.46
Fen1P39749 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Fen1P39749 AY702102-202ENSMUST00000194651 1173 ntBASIC12.15□□□□□ -0.46
Fen1P39749 Gm44882-201ENSMUST00000205702 802 ntBASIC12.15□□□□□ -0.46
Fen1P39749 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Gm24526-201ENSMUST00000082921 158 ntBASIC12.15□□□□□ -0.46
Fen1P39749 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 259.1 ms