Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Mmp13P33435 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Mmp13P33435 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Mmp13P33435 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp13P33435 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Mmp13P33435 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Mmp13P33435 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Mmp13P33435 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.37□□□□□ -0.43
Mmp13P33435 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.37□□□□□ -0.43
Mmp13P33435 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.37□□□□□ -0.43
Mmp13P33435 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.37□□□□□ -0.43
Mmp13P33435 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.37□□□□□ -0.43
Mmp13P33435 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.37□□□□□ -0.43
Mmp13P33435 Cts7-204ENSMUST00000225321 1257 ntBASIC12.37□□□□□ -0.43
Mmp13P33435 Morn2-202ENSMUST00000227729 656 ntBASIC12.37□□□□□ -0.43
Mmp13P33435 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Mmp13P33435 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Mmp13P33435 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Mmp13P33435 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Mmp13P33435 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Mmp13P33435 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp13P33435 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Mmp13P33435 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Mmp13P33435 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Mmp13P33435 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Mmp13P33435 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.36□□□□□ -0.43
Mmp13P33435 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.36□□□□□ -0.43
Mmp13P33435 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.36□□□□□ -0.43
Mmp13P33435 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Gm13316-201ENSMUST00000140537 691 ntBASIC12.36□□□□□ -0.43
Mmp13P33435 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.36□□□□□ -0.43
Mmp13P33435 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.36□□□□□ -0.43
Mmp13P33435 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.36□□□□□ -0.43
Mmp13P33435 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Gm45925-201ENSMUST00000218882 744 ntBASIC12.36□□□□□ -0.43
Mmp13P33435 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Mmp13P33435 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.36□□□□□ -0.43
Mmp13P33435 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Mmp13P33435 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp13P33435 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp13P33435 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Mmp13P33435 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Mmp13P33435 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 153 ms