Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RxrbP28704 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.13□□□□□ -0.47
RxrbP28704 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.13□□□□□ -0.47
RxrbP28704 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
RxrbP28704 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Gm12138-201ENSMUST00000122180 951 ntBASIC12.13□□□□□ -0.47
RxrbP28704 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.13□□□□□ -0.47
RxrbP28704 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
RxrbP28704 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.13□□□□□ -0.47
RxrbP28704 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.13□□□□□ -0.47
RxrbP28704 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RxrbP28704 Gm7561-201ENSMUST00000211203 886 ntBASIC12.13□□□□□ -0.47
RxrbP28704 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.13□□□□□ -0.47
RxrbP28704 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
RxrbP28704 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.13□□□□□ -0.47
RxrbP28704 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RxrbP28704 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
RxrbP28704 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.13□□□□□ -0.47
RxrbP28704 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
RxrbP28704 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
RxrbP28704 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.13□□□□□ -0.47
RxrbP28704 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.13□□□□□ -0.47
RxrbP28704 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RxrbP28704 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.12□□□□□ -0.47
RxrbP28704 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Gm11478-201ENSMUST00000117851 599 ntBASIC12.12□□□□□ -0.47
RxrbP28704 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.12□□□□□ -0.47
RxrbP28704 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.12□□□□□ -0.47
RxrbP28704 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.12□□□□□ -0.47
RxrbP28704 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.12□□□□□ -0.47
RxrbP28704 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.12□□□□□ -0.47
RxrbP28704 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.12□□□□□ -0.47
RxrbP28704 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RxrbP28704 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.12□□□□□ -0.47
RxrbP28704 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.12□□□□□ -0.47
RxrbP28704 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.12□□□□□ -0.47
RxrbP28704 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
RxrbP28704 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.12□□□□□ -0.47
RxrbP28704 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RxrbP28704 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
RxrbP28704 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RxrbP28704 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.11□□□□□ -0.47
RxrbP28704 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.11□□□□□ -0.47
RxrbP28704 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.11□□□□□ -0.47
RxrbP28704 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RxrbP28704 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RxrbP28704 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.11□□□□□ -0.47
RxrbP28704 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.11□□□□□ -0.47
RxrbP28704 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.11□□□□□ -0.47
RxrbP28704 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.11□□□□□ -0.47
RxrbP28704 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms