Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.05□□□□□ -0.48
Nckap1P28660 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.05□□□□□ -0.48
Nckap1P28660 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.05□□□□□ -0.48
Nckap1P28660 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Nckap1P28660 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.05□□□□□ -0.48
Nckap1P28660 Gm9630-201ENSMUST00000178304 885 ntBASIC12.05□□□□□ -0.48
Nckap1P28660 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.05□□□□□ -0.48
Nckap1P28660 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.05□□□□□ -0.48
Nckap1P28660 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.05□□□□□ -0.48
Nckap1P28660 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Nckap1P28660 Gm8956-201ENSMUST00000203939 825 ntBASIC12.05□□□□□ -0.48
Nckap1P28660 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.05□□□□□ -0.48
Nckap1P28660 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.05□□□□□ -0.48
Nckap1P28660 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.05□□□□□ -0.48
Nckap1P28660 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Gm10288-201ENSMUST00000084614 537 ntBASIC12.05□□□□□ -0.48
Nckap1P28660 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.05□□□□□ -0.48
Nckap1P28660 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nckap1P28660 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.05□□□□□ -0.48
Nckap1P28660 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.04□□□□□ -0.48
Nckap1P28660 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Nckap1P28660 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Nckap1P28660 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.04□□□□□ -0.48
Nckap1P28660 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Gm26286-201ENSMUST00000104166 134 ntBASIC12.04□□□□□ -0.48
Nckap1P28660 Gm12857-201ENSMUST00000117678 592 ntBASIC12.04□□□□□ -0.48
Nckap1P28660 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.04□□□□□ -0.48
Nckap1P28660 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.04□□□□□ -0.48
Nckap1P28660 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.04□□□□□ -0.48
Nckap1P28660 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Nckap1P28660 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.04□□□□□ -0.48
Nckap1P28660 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Gm8100-201ENSMUST00000182906 988 ntBASIC12.04□□□□□ -0.48
Nckap1P28660 Gm19353-201ENSMUST00000184561 445 ntBASIC12.04□□□□□ -0.48
Nckap1P28660 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.04□□□□□ -0.48
Nckap1P28660 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.04□□□□□ -0.48
Nckap1P28660 Gm2965-201ENSMUST00000198365 343 ntBASIC12.04□□□□□ -0.48
Nckap1P28660 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.04□□□□□ -0.48
Nckap1P28660 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.04□□□□□ -0.48
Nckap1P28660 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.04□□□□□ -0.48
Nckap1P28660 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.04□□□□□ -0.48
Nckap1P28660 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nckap1P28660 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.04□□□□□ -0.48
Nckap1P28660 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms