Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1bP25119 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1bP25119 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1bP25119 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1bP25119 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1bP25119 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Tnfrsf1bP25119 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.21□□□□□ -0.62
Tnfrsf1bP25119 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1bP25119 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1bP25119 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1bP25119 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1bP25119 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1bP25119 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1bP25119 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Tnfrsf1bP25119 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Tnfrsf1bP25119 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1bP25119 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Gm17812-201ENSMUST00000204935 318 ntBASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Gm8913-201ENSMUST00000209491 641 ntBASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.2□□□□□ -0.62
Tnfrsf1bP25119 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Gm15626-201ENSMUST00000117478 868 ntBASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Gm13996-201ENSMUST00000118456 430 ntBASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Gm12813-201ENSMUST00000119615 902 ntBASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Gm14247-201ENSMUST00000120950 237 ntBASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Gm2383-201ENSMUST00000181461 807 ntBASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Gm27390-201ENSMUST00000184516 176 ntBASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.19□□□□□ -0.62
Tnfrsf1bP25119 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms