Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Gm25214-201ENSMUST00000104573 129 ntBASIC11.42□□□□□ -0.58
TP20293 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
TP20293 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
TP20293 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.42□□□□□ -0.58
TP20293 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Gm14726-201ENSMUST00000120623 896 ntBASIC11.42□□□□□ -0.58
TP20293 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Gm2991-201ENSMUST00000173338 480 ntBASIC11.42□□□□□ -0.58
TP20293 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.42□□□□□ -0.58
TP20293 Gm3961-201ENSMUST00000204425 994 ntBASIC11.42□□□□□ -0.58
TP20293 Gm45865-201ENSMUST00000211815 945 ntBASIC11.42□□□□□ -0.58
TP20293 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
TP20293 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
TP20293 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.41□□□□□ -0.58
TP20293 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.41□□□□□ -0.58
TP20293 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
TP20293 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.41□□□□□ -0.58
TP20293 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.41□□□□□ -0.58
TP20293 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.41□□□□□ -0.58
TP20293 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.41□□□□□ -0.58
TP20293 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.41□□□□□ -0.58
TP20293 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
TP20293 Gm43179-201ENSMUST00000198797 275 ntBASIC11.41□□□□□ -0.58
TP20293 Gm44958-201ENSMUST00000203734 736 ntBASIC11.41□□□□□ -0.58
TP20293 Gm44124-201ENSMUST00000204159 472 ntBASIC11.41□□□□□ -0.58
TP20293 Gm6334-201ENSMUST00000207083 228 ntBASIC11.41□□□□□ -0.58
TP20293 Gm30285-201ENSMUST00000214614 422 ntBASIC11.41□□□□□ -0.58
TP20293 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.41□□□□□ -0.58
TP20293 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
TP20293 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
TP20293 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.41□□□□□ -0.58
TP20293 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TP20293 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
TP20293 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TP20293 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TP20293 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TP20293 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TP20293 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TP20293 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TP20293 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.4□□□□□ -0.58
TP20293 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TP20293 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TP20293 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TP20293 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TP20293 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TP20293 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TP20293 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
TP20293 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.4□□□□□ -0.58
TP20293 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TP20293 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
TP20293 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms