Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm5370-201ENSMUST00000187187 574 ntBASIC9.8□□□□□ -0.84
Cdx1P18111 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Gm19931-201ENSMUST00000198920 368 ntBASIC9.8□□□□□ -0.84
Cdx1P18111 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC9.8□□□□□ -0.84
Cdx1P18111 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Cdx1P18111 Gm40466-201ENSMUST00000212174 422 ntBASIC9.8□□□□□ -0.84
Cdx1P18111 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC9.8□□□□□ -0.84
Cdx1P18111 AC154171.1-201ENSMUST00000224610 643 ntBASIC9.8□□□□□ -0.84
Cdx1P18111 AC122459.1-201ENSMUST00000228373 885 ntBASIC9.8□□□□□ -0.84
Cdx1P18111 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Cdx1P18111 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Cdx1P18111 Gm2420-201ENSMUST00000119864 2149 ntBASIC9.8□□□□□ -0.84
Cdx1P18111 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC9.8□□□□□ -0.84
Cdx1P18111 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Cdx1P18111 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.8□□□□□ -0.84
Cdx1P18111 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC9.8□□□□□ -0.84
Cdx1P18111 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Cdx1P18111 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.8□□□□□ -0.84
Cdx1P18111 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx1P18111 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Cdx1P18111 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.79□□□□□ -0.84
Cdx1P18111 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
Cdx1P18111 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Cdx1P18111 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.79□□□□□ -0.84
Cdx1P18111 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Cdx1P18111 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC9.79□□□□□ -0.84
Cdx1P18111 Gm8213-201ENSMUST00000118191 441 ntBASIC9.79□□□□□ -0.84
Cdx1P18111 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC9.79□□□□□ -0.84
Cdx1P18111 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC9.79□□□□□ -0.84
Cdx1P18111 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.79□□□□□ -0.84
Cdx1P18111 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC9.79□□□□□ -0.84
Cdx1P18111 Gm6152-201ENSMUST00000151704 340 ntBASIC9.79□□□□□ -0.84
Cdx1P18111 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.79□□□□□ -0.84
Cdx1P18111 Gm22331-201ENSMUST00000158066 136 ntBASIC9.79□□□□□ -0.84
Cdx1P18111 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC9.79□□□□□ -0.84
Cdx1P18111 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC9.79□□□□□ -0.84
Cdx1P18111 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC9.79□□□□□ -0.84
Cdx1P18111 AC159896.2-201ENSMUST00000214753 269 ntBASIC9.79□□□□□ -0.84
Cdx1P18111 AC154319.1-201ENSMUST00000216330 312 ntBASIC9.79□□□□□ -0.84
Cdx1P18111 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC9.79□□□□□ -0.84
Cdx1P18111 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 AL589735.1-201ENSMUST00000224353 270 ntBASIC9.79□□□□□ -0.84
Cdx1P18111 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Cdx1P18111 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Cdx1P18111 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Cdx1P18111 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.79□□□□□ -0.84
Cdx1P18111 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Cdx1P18111 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx1P18111 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms