Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Gm24844-201ENSMUST00000158679 127 ntBASIC10.65□□□□□ -0.7
Ccl3P10855 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.65□□□□□ -0.7
Ccl3P10855 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Gm18367-201ENSMUST00000176139 600 ntBASIC10.65□□□□□ -0.7
Ccl3P10855 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.65□□□□□ -0.7
Ccl3P10855 Gm12407-201ENSMUST00000180219 324 ntBASIC10.65□□□□□ -0.7
Ccl3P10855 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.65□□□□□ -0.7
Ccl3P10855 Gm3551-201ENSMUST00000190750 664 ntBASIC10.65□□□□□ -0.7
Ccl3P10855 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.65□□□□□ -0.7
Ccl3P10855 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ccl3P10855 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.7
Ccl3P10855 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ccl3P10855 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Ccl3P10855 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.65□□□□□ -0.7
Ccl3P10855 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl3P10855 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ccl3P10855 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ccl3P10855 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Ccl3P10855 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Ccl3P10855 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.71
Ccl3P10855 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.65□□□□□ -0.71
Ccl3P10855 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ccl3P10855 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Ccl3P10855 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Ccl3P10855 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.64□□□□□ -0.71
Ccl3P10855 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.64□□□□□ -0.71
Ccl3P10855 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Gm16166-201ENSMUST00000118291 787 ntBASIC10.64□□□□□ -0.71
Ccl3P10855 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC10.64□□□□□ -0.71
Ccl3P10855 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC10.64□□□□□ -0.71
Ccl3P10855 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.64□□□□□ -0.71
Ccl3P10855 Gm3150-201ENSMUST00000166418 204 ntBASIC10.64□□□□□ -0.71
Ccl3P10855 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.64□□□□□ -0.71
Ccl3P10855 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.64□□□□□ -0.71
Ccl3P10855 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Gm3793-201ENSMUST00000204973 672 ntBASIC10.64□□□□□ -0.71
Ccl3P10855 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.64□□□□□ -0.71
Ccl3P10855 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.64□□□□□ -0.71
Ccl3P10855 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.64□□□□□ -0.71
Ccl3P10855 AC174797.2-202ENSMUST00000225729 568 ntBASIC10.64□□□□□ -0.71
Ccl3P10855 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Ccl3P10855 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.64□□□□□ -0.71
Ccl3P10855 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.64□□□□□ -0.71
Ccl3P10855 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.64□□□□□ -0.71
Ccl3P10855 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Ccl3P10855 Cog3-203ENSMUST00000227473 4197 ntBASIC10.64□□□□□ -0.71
Ccl3P10855 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ccl3P10855 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.63□□□□□ -0.71
Ccl3P10855 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Ccl3P10855 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ccl3P10855 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ccl3P10855 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ccl3P10855 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.63□□□□□ -0.71
Ccl3P10855 Gm26013-201ENSMUST00000104404 119 ntBASIC10.63□□□□□ -0.71
Ccl3P10855 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.63□□□□□ -0.71
Ccl3P10855 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.63□□□□□ -0.71
Ccl3P10855 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms