Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.21□□□□□ -0.46
Hoxb3P09026 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxb3P09026 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxb3P09026 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxb3P09026 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxb3P09026 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxb3P09026 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.21□□□□□ -0.46
Hoxb3P09026 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Hoxb3P09026 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm12961-201ENSMUST00000120507 1050 ntBASIC12.2□□□□□ -0.46
Hoxb3P09026 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm37631-201ENSMUST00000192275 364 ntBASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm37246-201ENSMUST00000192665 835 ntBASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm17812-201ENSMUST00000204935 318 ntBASIC12.2□□□□□ -0.46
Hoxb3P09026 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm19187-201ENSMUST00000206781 892 ntBASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.2□□□□□ -0.46
Hoxb3P09026 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.2□□□□□ -0.46
Hoxb3P09026 AC154683.1-201ENSMUST00000228409 1284 ntBASIC12.2□□□□□ -0.46
Hoxb3P09026 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.2□□□□□ -0.46
Hoxb3P09026 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxb3P09026 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxb3P09026 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb3P09026 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb3P09026 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.19□□□□□ -0.46
Hoxb3P09026 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb3P09026 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb3P09026 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.19□□□□□ -0.46
Hoxb3P09026 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb3P09026 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxb3P09026 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb3P09026 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb3P09026 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb3P09026 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.19□□□□□ -0.46
Hoxb3P09026 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb3P09026 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb3P09026 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxb3P09026 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb3P09026 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxb3P09026 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Hoxb3P09026 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb3P09026 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxb3P09026 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb3P09026 Gm23062-201ENSMUST00000102349 110 ntBASIC12.19□□□□□ -0.46
Hoxb3P09026 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb3P09026 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hoxb3P09026 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb3P09026 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxb3P09026 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxb3P09026 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxb3P09026 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms