Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
P06344 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
P06344 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.78□□□□□ -0.68
P06344 Rprl1-201ENSMUST00000158050 327 ntBASIC10.78□□□□□ -0.68
P06344 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Gm5616-201ENSMUST00000165252 384 ntBASIC10.78□□□□□ -0.68
P06344 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Gm8741-201ENSMUST00000174736 384 ntBASIC10.78□□□□□ -0.68
P06344 Gm27627-201ENSMUST00000183644 150 ntBASIC10.78□□□□□ -0.68
P06344 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.78□□□□□ -0.68
P06344 Gm29615-201ENSMUST00000185371 697 ntBASIC10.78□□□□□ -0.68
P06344 Gm28224-201ENSMUST00000186078 697 ntBASIC10.78□□□□□ -0.68
P06344 Gm29001-201ENSMUST00000186177 697 ntBASIC10.78□□□□□ -0.68
P06344 Gm28292-201ENSMUST00000186593 697 ntBASIC10.78□□□□□ -0.68
P06344 Gm28101-201ENSMUST00000187608 697 ntBASIC10.78□□□□□ -0.68
P06344 Gm29076-201ENSMUST00000187689 697 ntBASIC10.78□□□□□ -0.68
P06344 Gm28302-201ENSMUST00000187931 697 ntBASIC10.78□□□□□ -0.68
P06344 Gm28646-201ENSMUST00000188220 697 ntBASIC10.78□□□□□ -0.68
P06344 Gm28205-201ENSMUST00000189177 697 ntBASIC10.78□□□□□ -0.68
P06344 Gm29032-201ENSMUST00000189797 697 ntBASIC10.78□□□□□ -0.68
P06344 Gm28695-201ENSMUST00000190300 697 ntBASIC10.78□□□□□ -0.68
P06344 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Gm37448-201ENSMUST00000192795 697 ntBASIC10.78□□□□□ -0.68
P06344 Gm43962-201ENSMUST00000203898 190 ntBASIC10.78□□□□□ -0.68
P06344 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.78□□□□□ -0.68
P06344 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.78□□□□□ -0.68
P06344 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
P06344 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
P06344 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
P06344 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.78□□□□□ -0.68
P06344 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P06344 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P06344 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.77□□□□□ -0.68
P06344 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
P06344 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
P06344 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
P06344 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
P06344 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
P06344 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
P06344 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P06344 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
P06344 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
P06344 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P06344 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P06344 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P06344 Map1b-203ENSMUST00000223725 2669 ntBASIC10.77□□□□□ -0.69
P06344 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
P06344 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.77□□□□□ -0.69
P06344 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Gm23912-201ENSMUST00000104687 87 ntBASIC10.77□□□□□ -0.69
P06344 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
P06344 Gm7857-201ENSMUST00000117957 358 ntBASIC10.77□□□□□ -0.69
P06344 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.77□□□□□ -0.69
P06344 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.77□□□□□ -0.69
P06344 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.77□□□□□ -0.69
P06344 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
P06344 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.77□□□□□ -0.69
P06344 Gm28450-201ENSMUST00000187349 638 ntBASIC10.77□□□□□ -0.69
P06344 Gm7003-201ENSMUST00000195089 312 ntBASIC10.77□□□□□ -0.69
P06344 Gm18711-201ENSMUST00000199341 750 ntBASIC10.77□□□□□ -0.69
P06344 AY036118-201ENSMUST00000200021 923 ntBASIC10.77□□□□□ -0.69
P06344 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
P06344 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.77□□□□□ -0.69
P06344 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
P06344 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.77□□□□□ -0.69
P06344 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
P06344 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms