Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Hcn1O88704 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Hcn1O88704 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 Gm12058-201ENSMUST00000118614 437 ntBASIC11.6□□□□□ -0.55
Hcn1O88704 Gm13350-201ENSMUST00000120519 479 ntBASIC11.6□□□□□ -0.55
Hcn1O88704 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.6□□□□□ -0.55
Hcn1O88704 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Gm7584-201ENSMUST00000175829 940 ntBASIC11.6□□□□□ -0.55
Hcn1O88704 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.6□□□□□ -0.55
Hcn1O88704 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.6□□□□□ -0.55
Hcn1O88704 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Hcn1O88704 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hcn1O88704 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hcn1O88704 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.59□□□□□ -0.55
Hcn1O88704 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.59□□□□□ -0.55
Hcn1O88704 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 Gm11531-201ENSMUST00000117614 555 ntBASIC11.59□□□□□ -0.55
Hcn1O88704 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.59□□□□□ -0.55
Hcn1O88704 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Hcn1O88704 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Hcn1O88704 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.59□□□□□ -0.55
Hcn1O88704 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.59□□□□□ -0.55
Hcn1O88704 Gm30285-201ENSMUST00000214614 422 ntBASIC11.59□□□□□ -0.55
Hcn1O88704 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.59□□□□□ -0.55
Hcn1O88704 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.59□□□□□ -0.55
Hcn1O88704 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.59□□□□□ -0.55
Hcn1O88704 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Hcn1O88704 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hcn1O88704 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.59□□□□□ -0.55
Hcn1O88704 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.59□□□□□ -0.55
Hcn1O88704 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Hcn1O88704 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.55
Hcn1O88704 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Hcn1O88704 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Hcn1O88704 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Hcn1O88704 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.58□□□□□ -0.56
Hcn1O88704 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Gm25214-201ENSMUST00000104573 129 ntBASIC11.58□□□□□ -0.56
Hcn1O88704 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Hcn1O88704 Gm13315-201ENSMUST00000120376 991 ntBASIC11.58□□□□□ -0.56
Hcn1O88704 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Gm26956-201ENSMUST00000182176 986 ntBASIC11.58□□□□□ -0.56
Hcn1O88704 Gm37201-201ENSMUST00000191845 523 ntBASIC11.58□□□□□ -0.56
Hcn1O88704 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms