Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm12407-201ENSMUST00000180219 324 ntBASIC13.29□□□□□ -0.28
Trdmt1O55055 Gm28388-201ENSMUST00000186262 437 ntBASIC13.29□□□□□ -0.28
Trdmt1O55055 Gm37458-201ENSMUST00000194055 410 ntBASIC13.29□□□□□ -0.28
Trdmt1O55055 Gm42518-201ENSMUST00000196277 938 ntBASIC13.29□□□□□ -0.28
Trdmt1O55055 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.29□□□□□ -0.28
Trdmt1O55055 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trdmt1O55055 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trdmt1O55055 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.29□□□□□ -0.28
Trdmt1O55055 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trdmt1O55055 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trdmt1O55055 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
Trdmt1O55055 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trdmt1O55055 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.28□□□□□ -0.28
Trdmt1O55055 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trdmt1O55055 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.28□□□□□ -0.28
Trdmt1O55055 Gm13182-201ENSMUST00000122241 312 ntBASIC13.28□□□□□ -0.28
Trdmt1O55055 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trdmt1O55055 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Gm3150-201ENSMUST00000166418 204 ntBASIC13.28□□□□□ -0.28
Trdmt1O55055 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.28□□□□□ -0.28
Trdmt1O55055 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.28□□□□□ -0.28
Trdmt1O55055 Gm3551-201ENSMUST00000190750 664 ntBASIC13.28□□□□□ -0.28
Trdmt1O55055 Gm2875-201ENSMUST00000211333 360 ntBASIC13.28□□□□□ -0.28
Trdmt1O55055 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.28□□□□□ -0.28
Trdmt1O55055 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.28□□□□□ -0.28
Trdmt1O55055 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trdmt1O55055 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.28□□□□□ -0.28
Trdmt1O55055 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Trdmt1O55055 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.28□□□□□ -0.28
Trdmt1O55055 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.28□□□□□ -0.28
Trdmt1O55055 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdmt1O55055 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdmt1O55055 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trdmt1O55055 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdmt1O55055 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Trdmt1O55055 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdmt1O55055 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdmt1O55055 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trdmt1O55055 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trdmt1O55055 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trdmt1O55055 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdmt1O55055 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdmt1O55055 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdmt1O55055 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Trdmt1O55055 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.27□□□□□ -0.29
Trdmt1O55055 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Gm25076-201ENSMUST00000104098 132 ntBASIC13.27□□□□□ -0.29
Trdmt1O55055 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trdmt1O55055 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.27□□□□□ -0.29
Trdmt1O55055 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.27□□□□□ -0.29
Trdmt1O55055 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.27□□□□□ -0.29
Trdmt1O55055 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Gm42657-201ENSMUST00000201746 211 ntBASIC13.27□□□□□ -0.29
Trdmt1O55055 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.27□□□□□ -0.29
Trdmt1O55055 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.27□□□□□ -0.29
Trdmt1O55055 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.27□□□□□ -0.29
Trdmt1O55055 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.27□□□□□ -0.29
Trdmt1O55055 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trdmt1O55055 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms