Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cxcl13O55038 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cxcl13O55038 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.21□□□□□ -0.77
Cxcl13O55038 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cxcl13O55038 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cxcl13O55038 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cxcl13O55038 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cxcl13O55038 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cxcl13O55038 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cxcl13O55038 Gm8199-201ENSMUST00000121323 823 ntBASIC10.21□□□□□ -0.77
Cxcl13O55038 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.21□□□□□ -0.77
Cxcl13O55038 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cxcl13O55038 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cxcl13O55038 Gm10051-201ENSMUST00000145209 414 ntBASIC10.21□□□□□ -0.77
Cxcl13O55038 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
Cxcl13O55038 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Cxcl13O55038 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.21□□□□□ -0.77
Cxcl13O55038 Gm44124-201ENSMUST00000204159 472 ntBASIC10.21□□□□□ -0.77
Cxcl13O55038 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Cxcl13O55038 Gm17931-201ENSMUST00000208132 634 ntBASIC10.21□□□□□ -0.77
Cxcl13O55038 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.21□□□□□ -0.77
Cxcl13O55038 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.21□□□□□ -0.77
Cxcl13O55038 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cxcl13O55038 Ginm1-202ENSMUST00000065124 300 ntBASIC10.21□□□□□ -0.77
Cxcl13O55038 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Cxcl13O55038 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Cxcl13O55038 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.21□□□□□ -0.78
Cxcl13O55038 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cxcl13O55038 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cxcl13O55038 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cxcl13O55038 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Cxcl13O55038 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.21□□□□□ -0.78
Cxcl13O55038 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cxcl13O55038 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cxcl13O55038 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.21□□□□□ -0.78
Cxcl13O55038 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.21□□□□□ -0.78
Cxcl13O55038 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cxcl13O55038 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.21□□□□□ -0.78
Cxcl13O55038 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cxcl13O55038 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cxcl13O55038 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.21□□□□□ -0.78
Cxcl13O55038 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cxcl13O55038 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Cxcl13O55038 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cxcl13O55038 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.21□□□□□ -0.78
Cxcl13O55038 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.21□□□□□ -0.78
Cxcl13O55038 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Cxcl13O55038 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cxcl13O55038 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cxcl13O55038 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cxcl13O55038 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.21□□□□□ -0.78
Cxcl13O55038 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cxcl13O55038 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Cxcl13O55038 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.2□□□□□ -0.78
Cxcl13O55038 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.2□□□□□ -0.78
Cxcl13O55038 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Gm13809-201ENSMUST00000117921 597 ntBASIC10.2□□□□□ -0.78
Cxcl13O55038 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Cxcl13O55038 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.2□□□□□ -0.78
Cxcl13O55038 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.2□□□□□ -0.78
Cxcl13O55038 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Cxcl13O55038 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Gm19287-201ENSMUST00000203190 358 ntBASIC10.2□□□□□ -0.78
Cxcl13O55038 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cxcl13O55038 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.2□□□□□ -0.78
Cxcl13O55038 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl13O55038 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Cxcl13O55038 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
Cxcl13O55038 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl13O55038 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms