Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc1a6O35544 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc1a6O35544 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc1a6O35544 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc1a6O35544 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Slc1a6O35544 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Slc1a6O35544 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Slc1a6O35544 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Slc1a6O35544 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Slc1a6O35544 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Slc1a6O35544 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Slc1a6O35544 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Slc1a6O35544 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.89□□□□□ -0.51
Slc1a6O35544 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.89□□□□□ -0.51
Slc1a6O35544 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.89□□□□□ -0.51
Slc1a6O35544 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Gm24934-201ENSMUST00000103764 111 ntBASIC11.89□□□□□ -0.51
Slc1a6O35544 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.89□□□□□ -0.51
Slc1a6O35544 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Slc1a6O35544 Gm18711-201ENSMUST00000199341 750 ntBASIC11.89□□□□□ -0.51
Slc1a6O35544 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Gm8420-201ENSMUST00000097103 598 ntBASIC11.89□□□□□ -0.51
Slc1a6O35544 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Slc1a6O35544 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Slc1a6O35544 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc1a6O35544 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Slc1a6O35544 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Slc1a6O35544 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.88□□□□□ -0.51
Slc1a6O35544 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.88□□□□□ -0.51
Slc1a6O35544 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Slc1a6O35544 Gm14928-201ENSMUST00000120198 477 ntBASIC11.88□□□□□ -0.51
Slc1a6O35544 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Slc1a6O35544 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Gm5706-201ENSMUST00000181525 993 ntBASIC11.88□□□□□ -0.51
Slc1a6O35544 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Gm42937-201ENSMUST00000197360 752 ntBASIC11.88□□□□□ -0.51
Slc1a6O35544 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Slc1a6O35544 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.88□□□□□ -0.51
Slc1a6O35544 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.88□□□□□ -0.51
Slc1a6O35544 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.88□□□□□ -0.51
Slc1a6O35544 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc1a6O35544 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc1a6O35544 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc1a6O35544 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Slc1a6O35544 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc1a6O35544 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc1a6O35544 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.87□□□□□ -0.51
Slc1a6O35544 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc1a6O35544 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc1a6O35544 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc1a6O35544 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc1a6O35544 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc1a6O35544 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc1a6O35544 Gm8738-201ENSMUST00000172606 329 ntBASIC11.87□□□□□ -0.51
Slc1a6O35544 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.87□□□□□ -0.51
Slc1a6O35544 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.87□□□□□ -0.51
Slc1a6O35544 Gm27682-201ENSMUST00000183930 110 ntBASIC11.87□□□□□ -0.51
Slc1a6O35544 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.87□□□□□ -0.51
Slc1a6O35544 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms