Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Mir453-201ENSMUST00000104732 82 ntBASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col6a3E9PWQ3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Gm4925-202ENSMUST00000168843 1561 ntBASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Gm7805-201ENSMUST00000154348 448 ntBASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Gm25694-201ENSMUST00000175448 282 ntBASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Gm8730-201ENSMUST00000076373 954 ntBASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Gm4953-201ENSMUST00000077309 483 ntBASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a3E9PWQ3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Gm9771-201ENSMUST00000198267 1137 ntBASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Gm18711-201ENSMUST00000199341 750 ntBASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Gm8170-201ENSMUST00000218581 945 ntBASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Gm15476-201ENSMUST00000118247 1191 ntBASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a3E9PWQ3 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Gm15374-201ENSMUST00000119313 844 ntBASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Gm25154-201ENSMUST00000157123 119 ntBASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Nsmce2-203ENSMUST00000227173 1122 ntBASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms