Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 AC022682.1-201ENSMUST00000224624 2023 ntBASIC9.72□□□□□ -0.85
Chd6A3KFM7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Gm14227-201ENSMUST00000119431 629 ntBASIC9.72□□□□□ -0.85
Chd6A3KFM7 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Gm43966-201ENSMUST00000203301 612 ntBASIC9.72□□□□□ -0.85
Chd6A3KFM7 Gm18010-201ENSMUST00000203553 202 ntBASIC9.72□□□□□ -0.85
Chd6A3KFM7 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Gm8615-201ENSMUST00000025307 771 ntBASIC9.72□□□□□ -0.85
Chd6A3KFM7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Chd6A3KFM7 AC166491.1-201ENSMUST00000227053 2308 ntBASIC9.72□□□□□ -0.85
Chd6A3KFM7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Gm42769-201ENSMUST00000198576 1659 ntBASIC9.72□□□□□ -0.85
Chd6A3KFM7 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd6A3KFM7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Gm7150-201ENSMUST00000122032 981 ntBASIC9.71□□□□□ -0.85
Chd6A3KFM7 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC9.71□□□□□ -0.85
Chd6A3KFM7 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Chd6A3KFM7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.71□□□□□ -0.86
Chd6A3KFM7 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Chd6A3KFM7 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC9.7□□□□□ -0.86
Chd6A3KFM7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.7□□□□□ -0.86
Chd6A3KFM7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC9.7□□□□□ -0.86
Chd6A3KFM7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Chd6A3KFM7 Gm8815-201ENSMUST00000173809 620 ntBASIC9.7□□□□□ -0.86
Chd6A3KFM7 Gm18504-201ENSMUST00000220917 929 ntBASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms