Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.6□□□□□ -0.39
Scn1aA2APX8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.6□□□□□ -0.39
Scn1aA2APX8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.6□□□□□ -0.39
Scn1aA2APX8 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.6□□□□□ -0.39
Scn1aA2APX8 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Gm8731-201ENSMUST00000118088 412 ntBASIC12.6□□□□□ -0.39
Scn1aA2APX8 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Gm9540-201ENSMUST00000188230 478 ntBASIC12.6□□□□□ -0.39
Scn1aA2APX8 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.6□□□□□ -0.39
Scn1aA2APX8 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn1aA2APX8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.59□□□□□ -0.39
Scn1aA2APX8 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.59□□□□□ -0.39
Scn1aA2APX8 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Gm13916-201ENSMUST00000117368 628 ntBASIC12.59□□□□□ -0.39
Scn1aA2APX8 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.59□□□□□ -0.39
Scn1aA2APX8 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Gm10731-201ENSMUST00000181171 448 ntBASIC12.59□□□□□ -0.39
Scn1aA2APX8 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Gm42599-201ENSMUST00000201308 469 ntBASIC12.59□□□□□ -0.39
Scn1aA2APX8 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Gm8285-201ENSMUST00000208293 759 ntBASIC12.59□□□□□ -0.39
Scn1aA2APX8 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.59□□□□□ -0.39
Scn1aA2APX8 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.59□□□□□ -0.39
Scn1aA2APX8 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1aA2APX8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Scn1aA2APX8 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Scn1aA2APX8 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Scn1aA2APX8 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Scn1aA2APX8 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Scn1aA2APX8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Gm11663-201ENSMUST00000117888 290 ntBASIC12.58□□□□□ -0.4
Scn1aA2APX8 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Gm5714-201ENSMUST00000197343 566 ntBASIC12.58□□□□□ -0.4
Scn1aA2APX8 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Gm45770-201ENSMUST00000212105 616 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms