Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Lrtm1-203ENSMUST00000224760 3060 ntBASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gm43172-201ENSMUST00000202139 2137 ntBASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gm9115-201ENSMUST00000120192 1348 ntBASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gm17230-201ENSMUST00000171194 3942 ntBASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gm14928-201ENSMUST00000120198 477 ntBASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gm11597-201ENSMUST00000121423 964 ntBASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gm22331-201ENSMUST00000158066 136 ntBASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gm45384-201ENSMUST00000210451 277 ntBASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gm7441-201ENSMUST00000220697 1074 ntBASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 AC069562.3-201ENSMUST00000225387 587 ntBASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gm5356-201ENSMUST00000093326 615 ntBASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gm10339-203ENSMUST00000225409 1671 ntBASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gm37827-201ENSMUST00000194486 1542 ntBASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav13-4-dv7A0A075B6C2 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms